Submissions-App/CHANGELOG.md

202403.03

• Automated version construction.

202403.02

• Moved functions out of submission container to submission form
• Added submission editting functionality.

202403.01

• Added navigation in submission details to sample details.
• Updated cost calculations.

202402.04

• Addition of comments to gel box.

202402.01

• Addition of gel box for Artic quality control.

202401.04

• Large scale database refactor to increase modularity.

202401.01

• Improved tooltips and form regeneration.

202312.03

• Enabled creation of new submission types in gui.
• Enabled Equipment addition.

202312.02

• Bug fixes for switching kits

202312.01

• Control samples info now available in plate map.
• Backups will now create a regenerated xlsx file.
• Report generator now does sums automatically.

202311.04

• Added xlsx template files to the database.
• Switched session hand-off to sqlalchemy to abstract parent class.

202311.03

• Added in tabular log parser.
• Split main_window_functions into object specific functions.

202311.02

• Construct first strand integrated into Artic Import.
• Addition of query_or_create methods for some classes.

202311.01

• Kit integrity is now checked before creation of sql object to improve reagent type lookups.

202310.03

• Better flexibility with parsers pulling methods from database objects.

202310.02

• Improvements to First strand constructor.
• Submission forms can now be dragged and dropped into the form widget.

202310.01

• Controls linker is now depreciated.
• Controls will now be directly added to their submissions instead of having to run linker.
• Submission details now has additional html functionality in plate map.
• Added Submission Category to fields.
• Increased robustness of form parsers by adding custom procedures for each.

202309.04

• Updated KitAdder to add location info as well.
• Extraction kit can now be updated after import.
• Large scale refactoring to improve efficiency of database functions.

202309.03

• Autofill now adds name of reagent instead of type.

202309.02

• Massive restructure of app and database to allow better relationships between kits/reagenttypes & submissions/samples.

202308.03

• Large restructure of database to allow better relationships between kits/reagenttypes & submissions/samples.

202307.04

• Large scale refactor to clean up code.
• Settings now in the form of a pydantic object.
• Individual plate details now in html format.

202307.03

• Auto-filling of some empty cells in excel file.
• Better pydantic validations of missing data.

202307.02

• Better column counting for cost recovery purposes.
• Improvements to pydantic validations.

202307.01

• Fixed bug where date increment of controls not working for multiple same dates.
• Fixed bug by having lookup of reagents by lot and reagenttype instead of just lot.
• Added in pydantic to validate submission info.
• Moved parser to metadata based recognition of submission type.

202306.03

• Improve WW plate mapping by using layout in submission forms rather than PCR.

202306.02

• Addition of bacterial plate maps to details export.
• Change in Artic cost calculation to reflect multiple output plates per submission.

202306.01

• Large scale shake up of import and scraper functions.
• Addition of Artic scrapers.

202305.05

• Hitpicking now creates source plate map image.
• Hitpick plate map is now included in exported plate results.

202305.04

• Added in hitpicking for plates with PCR results
• Fixed error when expiry date stored as int in excel sheet.

202305.03

• Added a detailed tab to the cost report.

202305.02

• Added rudimentary barcode printing.
• Added ability to comment on submissions.
• Updated kit creation methods to keep pace with new cost calculations.

202305.01

• Improved kit cost calculation.

202304.04

• Added in discounts for kits based on kit used and submitting client.
• Kraken controls graph now only pulls top 50 results to prevent crashing.
• Improved cost calculations per column in a 96 well plate.

202304.01

• Improved function results output to ui.
• Added Well Call Assessment to PCR scraping.

202303.05

• Increased robustness of RSL plate number enforcement.
• Added in ability to scrape and include PCR results for wastewater.

202303.04

• Added in scraping of logs from the PCR table to add to wastewater submissions.
• Completed partial imports that will add in missing reagents found in the kit indicated by the user.
• Added web documentation to the help menu.

202303.03

• Increased robustness by utilizing PyQT6 widget names to pull data from forms instead of previously used label/input zip.
• Above allowed for creation of more helpful prompts.
• Added sorting feature to Submission summary.
• Reagent import dropdowns will now prioritize lot number found in a parsed sheet, moving it to the top of the list.