4.2 KiB
4.2 KiB
- Buuuuuuhh. Split polymorphic objects into different tables... and rebuild DB.... FFFFF
- Create a result object to facilitate returning function results.
- Refactor main_window_functions into as many objects (forms, etc.) as possible to clean it up.
- Integrate 'Construct First Strand' into the Artic import.
- Clear out any unnecessary ctx passes now that queries are improved.
- Make a 'query or create' method in all db objects to go with new query.
- Due to necessity of user input this has only been implemented for BasicSubmission, BasicSample and SubmissionSampleAssociation.
- Ensure Bacterial plates end up with RSL_YY_###{submitterName}{submitterPlateID}.xlsx format.
- Move lookup functions into class methods of db objects?
- Not sure if will work for associations.
- Update artic submission type database entry to add more technicians.
- Document code
- Rewrite tests... again.
- Have InfoItem change status self.missing to True if value changed.
- Make the kit verifier make more sense.
- Slim down the Import and Submit functions in main_window_functions.
- Create custom store methods for submission, reagent and sample.
- Make pydantic models for other things that use constructors.
- Move backend.db.functions.constructor functions into Pydantic models.
- This will allow for better data validation.
- Parser(client input) -> Pydantic(validation) -> Form(user input) -> Pydantic(validation) -> SQL
- Rebuild RSLNamer and fix circular imports
- Should be used when coming in to parser and when leaving form. NO OTHER PLACES.
- Change 'check_is_power_user' to decorator.
- Drag and drop files into submission form area?
- Get info for controls into their sample hitpicks.
- Move submission-type specific parser functions into class methods in their respective models.
- Improve function results reporting.
- Maybe make it a list until it gets to the reporter?
- Increase robustness of form parsers by adding custom procedures for each.
- Rerun Kit integrity if extraction kit changed in the form.
- Clean up db.functions.
- Make kits easier to add.
- Clean up & document code... again.
- Including paring down the logging.debugs
- Also including reducing number of functions in db.functions
- Fix Tests... again.
- Rebuild database
- Provide more generic names for reagenttypes in kits and move specific names to reagents.
- ex. Instead of "omega_e-z_96_disruptor_plate_c_plus" in reagent types, have "omega_plate" and have "omega_e-z_96_disruptor_plate_c_plus" in reagent name.
- Maybe rename to "ReagentRoles"?
- If I'm doing this, since the forms have a different layout for each submission type I should rewrite the parser to use the locations given in database... Which I should do anyway
- Fix Wastewater/Artic double submission problem
- Fix tests.
- Reorganize wastewater artic parser.
- Streamline addition of new kits by moving as much into DB as possible.
- Large scale refactor (2023-07-24).
- Make plate details from html, same as export.
- Put in SN controls I guess.
- Code clean-up and refactor (2023-07).
- Migrate context settings to pydantic-settings model.
- Insert column into reagent type to indicate if reagent is required for kit.
- Needed to keep interchangeable bead plates from being forced into forms.
- Migrate the parser.sub dictionary to pydantic models.
- Move type_decider to metadata based method rather than excel map.
- Solve bug for plate mapping when two samples of same name are in different rows.
- Try importing "L:\Robotics Laboratory Support\Submissions\Wastewater\2023\2023-06-21\RSL-WW-20230621-1.xlsx" for example.
- Improve plate mapping by using layout in submission forms rather than PCR.
- Create a method for creation of hitpicking .csvs because of reasons that may or may not exist.
- Create a method for commenting submissions.
- Create barcode generator, because of reasons that may or may not exist.
- Move bulk of functions from frontend.init to frontend.functions as init is getting bloated.