Addition of procedure parser in import.

src/submissions/backend/managers/results/pcr_results_manager.py

@@ -0,0 +1,32 @@
+"""
+
+"""
+import logging
+from pathlib import Path
+from backend.db.models import Procedure
+from backend.excel.parsers.results_parsers.pcr_results_parser import PCRSampleParser, PCRInfoParser
+from . import DefaultResults
+
+logger = logging.getLogger(f"submissions.{__name__}")
+
+class PCR(DefaultResults):
+
+    def __init__(self, procedure: Procedure, parent, fname:Path|str|None=None):
+        super().__init__(procedure=procedure, parent=parent, fname=fname)
+        self.info_parser = PCRInfoParser(filepath=self.fname, procedure=self.procedure)
+        self.sample_parser = PCRSampleParser(filepath=self.fname, procedure=self.procedure)
+        self.build_info()
+        self.build_samples()
+
+    def build_info(self):
+        procedure_info = self.info_parser.to_pydantic()
+        procedure_info.results_type = self.__class__.__name__
+        procedure_sql = procedure_info.to_sql()
+        procedure_sql.save()
+
+    def build_samples(self):
+        samples = self.sample_parser.to_pydantic()
+        for sample in samples:
+            sample.results_type = self.__class__.__name__
+            sql = sample.to_sql()
+            sql.save()