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Pre-sample/control connect

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This commit is contained in:
Landon Wark
2023-12-05 10:20:46 -06:00
parent 283e77fee5
commit cddb947ec8
29 changed files with 1357 additions and 1042 deletions
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13
src/submissions/backend/validators/__init__.py
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@@ -12,7 +12,6 @@ class RSLNamer(object):
"""
def __init__(self, instr:str, sub_type:str|None=None, data:dict|None=None):
self.submission_type = sub_type
if self.submission_type == None:
self.submission_type = self.retrieve_submission_type(instr=instr)
logger.debug(f"got submission type: {self.submission_type}")
@@ -23,6 +22,15 @@ class RSLNamer(object):
@classmethod
def retrieve_submission_type(cls, instr:str|Path) -> str:
"""
Gets submission type from excel file properties or sheet names or regex pattern match or user input
Args:
instr (str | Path): filename
Returns:
str: parsed submission type
"""
match instr:
case Path():
logger.debug(f"Using path method for {instr}.")
@@ -32,7 +40,8 @@ class RSLNamer(object):
submission_type = [item.strip().title() for item in wb.properties.category.split(";")][0]
except AttributeError:
try:
sts = {item.name:item.info_map['all_sheets'] for item in SubmissionType.query(key="all_sheets")}
# sts = {item.name:item.info_map['all_sheets'] for item in SubmissionType.query(key="all_sheets")}
sts = {item.name:item.get_template_file_sheets() for item in SubmissionType.query()}
for k,v in sts.items():
# This gets the *first* submission type that matches the sheet names in the workbook
if wb.sheetnames == v: