mid refactor for improved rebustness and readability
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@@ -21,7 +21,7 @@ class KitType(Base):
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name = Column(String(64), unique=True) #: name of kit
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submissions = relationship("BasicSubmission", back_populates="extraction_kit") #: submissions this kit was used for
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used_for = Column(JSON) #: list of names of sample types this kit can process
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cost_per_run = Column(FLOAT(2)) #: dollar amount for each full run of this kit
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cost_per_run = Column(FLOAT(2)) #: dollar amount for each full run of this kit NOTE: depreciated, use the constant and mutable costs instead
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mutable_cost = Column(FLOAT(2)) #: dollar amount that can change with number of columns (reagents, tips, etc)
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constant_cost = Column(FLOAT(2)) #: dollar amount that will remain constant (plates, man hours, etc)
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reagent_types = relationship("ReagentType", back_populates="kits", uselist=True, secondary=reagenttypes_kittypes) #: reagent types this kit contains
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@@ -81,9 +81,7 @@ class Reagent(Base):
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Returns:
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str: string representing this object's type and lot number
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"""
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lot = str(self.lot)
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r_type = str(self.type)
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return f"{r_type} - {lot}"
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return str(self.lot)
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def to_sub_dict(self) -> dict:
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"""
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