Second round of code cleanup.
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@@ -2,9 +2,6 @@
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Functions for constructing irida controls graphs using plotly.
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"""
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from pprint import pformat
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from plotly.graph_objs import FigureWidget, Scatter
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from . import CustomFigure
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import plotly.express as px
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import pandas as pd
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@@ -13,30 +10,23 @@ import logging
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logger = logging.getLogger(f"submissions.{__name__}")
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# NOTE: For click events try (haven't got working yet) ipywidgets >=7.0.0 required for figurewidgets:
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# https://plotly.com/python/click-events/
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class PCRFigure(CustomFigure):
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def __init__(self, df: pd.DataFrame, modes: list, ytitle: str | None = None, parent: QWidget | None = None,
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months: int = 6):
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super().__init__(df=df, modes=modes)
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logger.debug(f"DF: {self.df}")
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# logger.debug(f"DF: {self.df}")
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self.construct_chart(df=df)
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def hello(self):
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print("hello")
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def construct_chart(self, df: pd.DataFrame):
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logger.debug(f"PCR df:\n {df}")
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# logger.debug(f"PCR df:\n {df}")
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try:
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express = px.scatter(data_frame=df, x='submitted_date', y="ct",
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scatter = px.scatter(data_frame=df, x='submitted_date', y="ct",
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hover_data=["name", "target", "ct", "reagent_lot"],
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color="target")
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except ValueError:
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express = px.scatter()
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scatter = FigureWidget([datum for datum in express.data])
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scatter = px.scatter()
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self.add_traces(scatter.data)
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self.update_traces(marker={'size': 15})
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