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added kraken data to details.

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This commit is contained in:
Landon Wark
2023-02-06 13:39:35 -06:00
parent 7fb5bb12f3
commit 963ac7d4a4
11 changed files with 177 additions and 24 deletions
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20
src/submissions/frontend/__init__.py
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@@ -35,6 +35,7 @@ import numpy
from frontend.custom_widgets import AddReagentQuestion, AddReagentForm, SubmissionsSheet, ReportDatePicker, KitAdder, ControlsDatePicker, OverwriteSubQuestion
import logging
import difflib
from getpass import getuser
from datetime import date
from frontend.visualizations.charts import create_charts
@@ -65,7 +66,7 @@ class App(QMainWindow):
self._createMenuBar()
self._createToolBar()
self._connectActions()
self.controls_getter()
self._controls_getter()
self.show()
@@ -109,10 +110,10 @@ class App(QMainWindow):
self.addReagentAction.triggered.connect(self.add_reagent)
self.generateReportAction.triggered.connect(self.generateReport)
self.addKitAction.triggered.connect(self.add_kit)
self.table_widget.control_typer.currentIndexChanged.connect(self.controls_getter)
self.table_widget.mode_typer.currentIndexChanged.connect(self.controls_getter)
self.table_widget.datepicker.start_date.dateChanged.connect(self.controls_getter)
self.table_widget.datepicker.end_date.dateChanged.connect(self.controls_getter)
self.table_widget.control_typer.currentIndexChanged.connect(self._controls_getter)
self.table_widget.mode_typer.currentIndexChanged.connect(self._controls_getter)
self.table_widget.datepicker.start_date.dateChanged.connect(self._controls_getter)
self.table_widget.datepicker.end_date.dateChanged.connect(self._controls_getter)
def importSubmission(self):
@@ -268,6 +269,7 @@ class App(QMainWindow):
# logger.debug(info)
# move samples into preliminary submission dict
info['samples'] = self.samples
info['uploaded_by'] = getuser()
# construct submission object
logger.debug(f"Here is the info_dict: {pprint.pformat(info)}")
base_submission, output = construct_submission_info(ctx=self.ctx, info_dict=info)
@@ -445,7 +447,7 @@ class App(QMainWindow):
def controls_getter(self):
def _controls_getter(self):
"""
Lookup controls from database and send to chartmaker
"""
@@ -476,14 +478,14 @@ class App(QMainWindow):
with QSignalBlocker(self.table_widget.sub_typer) as blocker:
self.table_widget.sub_typer.addItems(sub_types)
self.table_widget.sub_typer.setEnabled(True)
self.table_widget.sub_typer.currentTextChanged.connect(self.chart_maker)
self.table_widget.sub_typer.currentTextChanged.connect(self._chart_maker)
else:
self.table_widget.sub_typer.clear()
self.table_widget.sub_typer.setEnabled(False)
self.chart_maker()
self._chart_maker()
def chart_maker(self):
def _chart_maker(self):
"""
Creates plotly charts for webview
"""