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Upgrade of editting functions.

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This commit is contained in:
Landon Wark
2024-03-12 15:16:47 -05:00
parent badf6e21c8
commit 7cc9dd64c3
6 changed files with 105 additions and 52 deletions
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6
src/submissions/backend/db/models/submissions.py
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@@ -372,7 +372,9 @@ class BasicSubmission(BaseClass):
sample, _ = sample.toSQL(submission=self)
return
case "reagents":
logger.debug(f"Reagents coming into SQL: {value}")
field_value = [reagent['value'].toSQL()[0] if isinstance(reagent, dict) else reagent.toSQL()[0] for reagent in value]
logger.debug(f"Reagents coming out of SQL: {field_value}")
case "submission_type":
field_value = SubmissionType.query(name=value)
case "sample_count":
@@ -392,8 +394,8 @@ class BasicSubmission(BaseClass):
# insert into field
try:
self.__setattr__(key, field_value)
except AttributeError:
logger.error(f"Could not set {self} attribute {key} to {value}")
except AttributeError as e:
logger.error(f"Could not set {self} attribute {key} to {value} due to \n{e}")
def update_subsampassoc(self, sample:BasicSample, input_dict:dict):
"""