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Removed logger.debugs for proven functions.

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This commit is contained in:
lwark
2024-12-12 12:17:21 -06:00
parent b174eb1221
commit 67520cb784
32 changed files with 80 additions and 758 deletions
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15
src/submissions/frontend/widgets/submission_details.py
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@@ -45,7 +45,6 @@ class SubmissionDetails(QDialog):
self.btn.clicked.connect(self.save_pdf)
self.back = QPushButton("Back")
self.back.setFixedWidth(100)
# self.back.clicked.connect(self.back_function)
self.back.clicked.connect(self.webview.back)
self.layout.addWidget(self.back, 0, 0, 1, 1)
self.layout.addWidget(self.btn, 0, 1, 1, 9)
@@ -70,7 +69,6 @@ class SubmissionDetails(QDialog):
if "Submission" in title:
self.btn.setEnabled(True)
self.export_plate = title.split(" ")[-1]
# logger.debug(f"Updating export plate to: {self.export_plate}")
else:
self.btn.setEnabled(False)
try:
@@ -78,7 +76,6 @@ class SubmissionDetails(QDialog):
except IndexError as e:
check = title
if title == check:
# logger.debug("Disabling back button")
self.back.setEnabled(False)
else:
self.back.setEnabled(True)
@@ -91,7 +88,6 @@ class SubmissionDetails(QDialog):
Args:
sample (str): Submitter Id of the sample.
"""
# logger.debug(f"Details: {sample}")
if isinstance(sample, str):
sample = BasicSample.query(submitter_id=sample)
base_dict = sample.to_sub_dict(full_data=True)
@@ -114,7 +110,6 @@ class SubmissionDetails(QDialog):
base_dict = reagent.to_sub_dict(extraction_kit=self.kit, full_data=True)
env = jinja_template_loading()
temp_name = "reagent_details.html"
# logger.debug(f"Returning template: {temp_name}")
try:
template = env.get_template(temp_name)
except TemplateNotFound as e:
@@ -147,29 +142,23 @@ class SubmissionDetails(QDialog):
Args:
submission (str | BasicSubmission): Submission of interest.
"""
# logger.debug(f"Details for: {submission}")
if isinstance(submission, str):
submission = BasicSubmission.query(rsl_plate_num=submission)
self.rsl_plate_num = submission.rsl_plate_num
self.base_dict = submission.to_dict(full_data=True)
# logger.debug(f"Submission details data:\n{pformat({k:v for k,v in self.base_dict.items() if k == 'reagents'})}")
# NOTE: don't want id
# logger.debug(f"Creating barcode.")
# logger.debug(f"Making platemap...")
self.base_dict['platemap'] = submission.make_plate_map(sample_list=submission.hitpick_plate())
self.base_dict['excluded'] = submission.get_default_info("details_ignore")
self.base_dict, self.template = submission.get_details_template(base_dict=self.base_dict)
template_path = Path(self.template.environment.loader.__getattribute__("searchpath")[0])
with open(template_path.joinpath("css", "styles.css"), "r") as f:
css = f.read()
# logger.debug(f"Submission_details: {pformat(self.base_dict)}")
# logger.debug(f"User is power user: {is_power_user()}")
self.html = self.template.render(sub=self.base_dict, permission=is_power_user(), css=css)
self.webview.setHtml(self.html)
@pyqtSlot(str)
def sign_off(self, submission: str | BasicSubmission):
logger.debug(f"Signing off on {submission} - ({getuser()})")
logger.info(f"Signing off on {submission} - ({getuser()})")
if isinstance(submission, str):
submission = BasicSubmission.query(rsl_plate_num=submission)
submission.signed_by = getuser()
@@ -195,7 +184,6 @@ class SubmissionComment(QDialog):
super().__init__(parent)
try:
self.app = parent.parent().parent().parent().parent().parent().parent
# logger.debug(f"App: {self.app}")
except AttributeError:
pass
self.submission = submission
@@ -225,5 +213,4 @@ class SubmissionComment(QDialog):
return None
dt = datetime.strftime(datetime.now(), "%Y-%m-%d %H:%M:%S")
full_comment = {"name": commenter, "time": dt, "text": comment}
# logger.debug(f"Full comment: {full_comment}")
return full_comment