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Removed logger.debugs for proven functions.

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This commit is contained in:
lwark
2024-12-12 12:17:21 -06:00
parent b174eb1221
commit 67520cb784
32 changed files with 80 additions and 758 deletions
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20
src/submissions/frontend/widgets/app.py
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@@ -27,13 +27,11 @@ from .turnaround import TurnaroundTime
from .omni_search import SearchBox
logger = logging.getLogger(f'submissions.{__name__}')
# logger.info("Hello, I am a logger")
class App(QMainWindow):
def __init__(self, ctx: Settings = None):
# logger.debug(f"Initializing main window...")
super().__init__()
qInstallMessageHandler(lambda x, y, z: None)
self.ctx = ctx
@@ -68,7 +66,6 @@ class App(QMainWindow):
"""
adds items to menu bar
"""
# logger.debug(f"Creating menu bar...")
menuBar = self.menuBar()
fileMenu = menuBar.addMenu("&File")
editMenu = menuBar.addMenu("&Edit")
@@ -82,7 +79,6 @@ class App(QMainWindow):
fileMenu.addAction(self.importAction)
fileMenu.addAction(self.yamlExportAction)
fileMenu.addAction(self.yamlImportAction)
# methodsMenu.addAction(self.searchLog)
methodsMenu.addAction(self.searchSample)
maintenanceMenu.addAction(self.joinExtractionAction)
maintenanceMenu.addAction(self.joinPCRAction)
@@ -92,27 +88,20 @@ class App(QMainWindow):
"""
adds items to toolbar
"""
# logger.debug(f"Creating toolbar...")
toolbar = QToolBar("My main toolbar")
self.addToolBar(toolbar)
toolbar.addAction(self.addReagentAction)
# toolbar.addAction(self.addKitAction)
# toolbar.addAction(self.addOrgAction)
def _createActions(self):
"""
creates actions
"""
# logger.debug(f"Creating actions...")
self.importAction = QAction("&Import Submission", self)
self.addReagentAction = QAction("Add Reagent", self)
# self.addKitAction = QAction("Import Kit", self)
# self.addOrgAction = QAction("Import Org", self)
self.joinExtractionAction = QAction("Link Extraction Logs")
self.joinPCRAction = QAction("Link PCR Logs")
self.helpAction = QAction("&About", self)
self.docsAction = QAction("&Docs", self)
# self.searchLog = QAction("Search Log", self)
self.searchSample = QAction("Search Sample", self)
self.githubAction = QAction("Github", self)
self.yamlExportAction = QAction("Export Type Example", self)
@@ -123,14 +112,12 @@ class App(QMainWindow):
"""
connect menu and tool bar item to functions
"""
# logger.debug(f"Connecting actions...")
self.importAction.triggered.connect(self.table_widget.formwidget.importSubmission)
self.addReagentAction.triggered.connect(self.table_widget.formwidget.add_reagent)
self.joinExtractionAction.triggered.connect(self.table_widget.sub_wid.link_extractions)
self.joinPCRAction.triggered.connect(self.table_widget.sub_wid.link_pcr)
self.helpAction.triggered.connect(self.showAbout)
self.docsAction.triggered.connect(self.openDocs)
# self.searchLog.triggered.connect(self.runSearch)
self.searchSample.triggered.connect(self.runSampleSearch)
self.githubAction.triggered.connect(self.openGithub)
self.yamlExportAction.triggered.connect(self.export_ST_yaml)
@@ -145,7 +132,6 @@ class App(QMainWindow):
j_env = jinja_template_loading()
template = j_env.get_template("project.html")
html = template.render(info=self.ctx.package.__dict__)
# logger.debug(html)
about = HTMLPop(html=html, title="About")
about.exec()
@@ -157,7 +143,6 @@ class App(QMainWindow):
url = Path(sys._MEIPASS).joinpath("files", "docs", "index.html")
else:
url = Path("docs\\build\\index.html").absolute()
# logger.debug(f"Attempting to open {url}")
webbrowser.get('windows-default').open(f"file://{url.__str__()}")
def openGithub(self):
@@ -177,10 +162,6 @@ class App(QMainWindow):
instr = HTMLPop(html=html, title="Instructions")
instr.exec()
# def runSearch(self):
# dlg = LogParser(self)
# dlg.exec()
def runSampleSearch(self):
"""
Create a search for samples.
@@ -253,7 +234,6 @@ class App(QMainWindow):
class AddSubForm(QWidget):
def __init__(self, parent: QWidget):
# logger.debug(f"Initializating subform...")
super(QWidget, self).__init__(parent)
self.layout = QVBoxLayout(self)
# NOTE: Initialize tab screen