landon/Submissions-App
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Updates to details interface.

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This commit is contained in:
lwark
2025-07-16 14:12:03 -05:00
parent 02c88256f2
commit 53c6668ce1
12 changed files with 276 additions and 71 deletions
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23
src/submissions/frontend/widgets/submission_widget.py
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@@ -1,6 +1,8 @@
"""
Contains all procedure related frontend functions
"""
import sys
from PyQt6.QtWidgets import (
QWidget, QPushButton, QVBoxLayout,
QComboBox, QDateEdit, QLineEdit, QLabel, QCheckBox, QHBoxLayout, QGridLayout
@@ -142,9 +144,9 @@ class SubmissionFormContainer(QWidget):
# self.pydclientsubmission = self.clientsubmissionparser.to_pydantic()
# self.pydsamples = self.sampleparser.to_pydantic()
# logger.debug(f"Samples: {pformat(self.pydclientsubmission.sample)}")
self.clientsubmission_manager = DefaultClientSubmissionManager(parent=self, fname=fname)
self.clientsubmission_manager = DefaultClientSubmissionManager(parent=self, input_object=fname)
self.pydclientsubmission = self.clientsubmission_manager.parse()
checker = SampleChecker(self, "Sample Checker", self.pydclientsubmission.samples)
checker = SampleChecker(self, "Sample Checker", self.pydclientsubmission.sample)
if checker.exec():
# logger.debug(pformat(self.pydclientsubmission.sample))
try:
@@ -189,7 +191,7 @@ class SubmissionFormContainer(QWidget):
class SubmissionFormWidget(QWidget):
update_reagent_fields = ['kittype']
def __init__(self, parent: QWidget, pyd: PydRun, disable: list | None = None) -> None:
def __init__(self, parent: QWidget, pyd: PydClientSubmission, disable: list | None = None) -> None:
super().__init__(parent)
if disable is None:
disable = []
@@ -816,8 +818,8 @@ class ClientSubmissionFormWidget(SubmissionFormWidget):
except AttributeError:
pass
# save_btn = QPushButton("Save")
self.samples = samples
logger.debug(f"Samples: {self.samples}")
self.sample = samples
logger.debug(f"Samples: {self.sample}")
start_run_btn = QPushButton("Save")
# self.layout.addWidget(save_btn)
self.layout.addWidget(start_run_btn)
@@ -867,12 +869,19 @@ class ClientSubmissionFormWidget(SubmissionFormWidget):
@report_result
def create_new_submission(self, *args) -> Report:
pyd = self.to_pydantic()
logger.debug(f"Pydantic: {pyd}")
sql = pyd.to_sql()
for sample in self.samples:
for sample in pyd.sample:
if isinstance(sample, PydSample):
sample = sample.to_sql()
assert not isinstance(sample, PydSample)
# if sample not in sql.sample:
sql.add_sample(sample=sample)
logger.debug(sql.__dict__)
logger.debug(pformat(sql.__dict__))
try:
del sql._misc_info['sample']
except KeyError:
pass
sql.save()
self.app.table_widget.sub_wid.set_data()
self.setParent(None)