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Added importing of PCR results.

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This commit is contained in:
Landon Wark
2023-03-28 14:44:13 -05:00
parent d50a9793c7
commit 3c9f095937
16 changed files with 562 additions and 70 deletions
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23
src/submissions/templates/submission_details.html
View File

@@ -3,9 +3,10 @@
<head>
<title>Submission Details for {{ sub['Plate Number'] }}</title>
</head>
{% set excluded = ['reagents', 'samples', 'controls', 'ext_info', 'pcr_info'] %}
<body>
<h2><u>Submission Details for {{ sub['Plate Number'] }}</u></h2>
<p>{% for key, value in sub.items() if key != 'reagents' and key != 'samples' and key != 'controls' and key != 'ext_info' %}
<p>{% for key, value in sub.items() if key not in excluded %}
{% if loop.index == 1 %}
&nbsp;&nbsp;&nbsp;{% if key=='Cost' %}{{ key }}: {{ "${:,.2f}".format(value) }}{% else %}{{ key }}: {{ value }}{% endif %}<br>
{% else %}
@@ -62,5 +63,25 @@
{% endfor %}</p>
{% endfor %}
{% endif %}
{% if sub['pcr_info'] %}
{% for entry in sub['pcr_info'] %}
{% if 'comment' not in entry.keys() %}
<h3><u>qPCR Momentum Status:</u></h3>
{% else %}
<h3><u>qPCR Status:</u></h3>
{% endif %}
<p>{% for key, value in entry.items() if key != 'imported_by'%}
{% if loop.index == 1%}
&nbsp;&nbsp;&nbsp;{{ key|replace('_', ' ')|title() }}: {{ value }}<br>
{% else %}
{% if "column" in key %}
&nbsp;&nbsp;&nbsp;&nbsp;{{ key|replace('_', ' ')|title() }}: {{ value }}uL<br>
{% else %}
&nbsp;&nbsp;&nbsp;&nbsp;{{ key|replace('_', ' ')|title() }}: {{ value }}<br>
{% endif %}
{% endif %}
{% endfor %}</p>
{% endfor %}
{% endif %}
</body>
</html>

17
src/submissions/templates/submission_details.txt
View File

@@ -1,6 +1,7 @@
{# template for constructing submission details #}
{% for key, value in sub.items() if key != 'reagents' and key != 'samples' and key != 'controls' and key != 'ext_info' %}
{% set excluded = ['reagents', 'samples', 'controls', 'ext_info', 'pcr_info'] %}
{# for key, value in sub.items() if key != 'reagents' and key != 'samples' and key != 'controls' and key != 'ext_info' #}
{% for key, value in sub.items() if key not in excluded %}
{% if key=='Cost' %} {{ key }}: {{ "${:,.2f}".format(value) }} {% else %} {{ key }}: {{ value }} {% endif %}
{% endfor %}
Reagents:
@@ -9,7 +10,7 @@ Reagents:
{% if sub['samples']%}
Samples:
{% for item in sub['samples'] %}
{{ item['well'] }}: {{ item['name'] }}{% endfor %}{% endif %}
{{ item['well'] }}: {{ item['name'] }}{% endfor %}{% endif %}
{% if sub['controls'] %}
Attached Controls:
{% for item in sub['controls'] %}
@@ -22,6 +23,10 @@ Attached Controls:
{% if sub['ext_info'] %}{% for entry in sub['ext_info'] %}
Extraction Status:
{% for key, value in entry.items() %}
{{ key|replace('_', ' ')|title() }}: {{ value }}{% endfor %}
{% endfor %}
{% endif %}
{{ key|replace('_', ' ')|title() }}: {{ value }}{% endfor %}{% endfor %}{% endif %}
{% if sub['pcr_info'] %}{% for entry in sub['pcr_info'] %}
{% if 'comment' not in entry.keys() %}qPCR Momentum Status:{% else %}
qPCR Status{% endif %}
{% for key, value in entry.items() if key != 'imported_by' %}
{{ key|replace('_', ' ')|title() }}: {{ value }}{% endfor %}{% endfor %}
{% endif %}