Better flexibility with parsers pulling methods from database objects.

This commit is contained in:
Landon Wark
2023-10-17 15:16:34 -05:00
parent 0a90542e8e
commit 39b94405e5
14 changed files with 296 additions and 610 deletions

View File

@@ -27,7 +27,6 @@ from backend.db.functions import (
construct_submission_info, lookup_reagents, construct_kit_from_yaml, construct_org_from_yaml, get_control_subtypes,
update_subsampassoc_with_pcr, check_kit_integrity, update_last_used, lookup_organizations, lookup_kit_types,
lookup_submissions, lookup_controls, lookup_samples, lookup_submission_sample_association, store_object, lookup_submission_type,
get_polymorphic_subclass
)
from backend.excel.parser import SheetParser, PCRParser, SampleParser
from backend.excel.reports import make_report_html, make_report_xlsx, convert_data_list_to_df
@@ -56,9 +55,7 @@ def import_submission_function(obj:QMainWindow, fname:Path|None=None) -> Tuple[Q
logger.debug(obj.ctx)
# initialize samples
obj.samples = []
obj.missing_info = []
# set file dialog
if isinstance(fname, bool) or fname == None:
fname = select_open_file(obj, file_extension="xlsx")